Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 2422627 - 2422702 | Not Available |
| is1 transposase | HMPREF9720_1320 | Not Available | Positive | 2422956 - 2423603 | 24892.2 |
| hypothetical protein | HMPREF9720_1321 | Not Available | Positive | 2423719 - 2425005 | 49246.7 |
| hypothetical protein | HMPREF9720_1322 | Not Available | Positive | 2425019 - 2425726 | 27257.3 |
| hypothetical protein | HMPREF9720_1323 | Not Available | Positive | 2426289 - 2427353 | 41350.9 |
| transcription termination/antitermination factor nusg | HMPREF9720_1324 | Not Available | Positive | 2427849 - 2428391 | 20682.1 |
| undecaprenyl-phosphate glucose phosphotransferase | HMPREF9720_1325 | Not Available | Positive | 2428465 - 2429859 | 53806.3 |
| glucose-1-phosphate thymidylyltransferase | HMPREF9720_1326 | Not Available | Positive | 2429872 - 2430750 | 31915.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HMPREF9720_1327 | Not Available | Positive | 2430755 - 2431327 | 21611.3 |
| dtdp-4-dehydrorhamnose reductase | HMPREF9720_1328 | Not Available | Positive | 2431320 - 2432183 | 31706.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
