Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | HMPREF9720_1309 | Not Available | Negative | 2406869 - 2407816 | 35168.4 |
| imidazolonepropionase | HMPREF9720_1310 | Not Available | Negative | 2407839 - 2409080 | 44943.5 |
| histidine ammonia-lyase | HMPREF9720_1311 | Not Available | Negative | 2409077 - 2410558 | 54630.8 |
| urocanate hydratase | HMPREF9720_1312 | Not Available | Negative | 2410575 - 2412596 | 75350.7 |
| glutamate formimidoyltransferase | HMPREF9720_1313 | Not Available | Negative | 2412602 - 2414353 | 62810.5 |
| tonb-dependent receptor | HMPREF9720_1314 | Not Available | Negative | 2414627 - 2416747 | 78545.5 |
| cysteate synthase | HMPREF9720_1315 | Not Available | Negative | 2417056 - 2418363 | 47840.2 |
| carboxynorspermidine decarboxylase | HMPREF9720_1316 | Not Available | Negative | 2418384 - 2419514 | 42579.2 |
| ompa family protein | HMPREF9720_1317 | Not Available | Negative | 2419819 - 2420949 | 40180.1 |
| saccharopine dehydrogenase | HMPREF9720_1318 | Not Available | Negative | 2421306 - 2422496 | 44159.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
