Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1299 | Not Available | Positive | 2398984 - 2399616 | 24007.0 |
| hypothetical protein | HMPREF9720_1300 | Not Available | Positive | 2399717 - 2400205 | 17898.6 |
| putative rna methyltransferase, rsmd family | HMPREF9720_1301 | Not Available | Positive | 2400196 - 2400732 | 20324.2 |
| Trna-asp | Not Available | Not Available | Positive | 2400964 - 2401040 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2401093 - 2401166 | Not Available |
| hypothetical protein | HMPREF9720_1304 | Not Available | Positive | 2401291 - 2401407 | 3858.71 |
| aminotransferase, class i/ii | HMPREF9720_1305 | Not Available | Positive | 2402105 - 2403271 | 43574.3 |
| hypothetical protein | HMPREF9720_1306 | Not Available | Negative | 2403677 - 2404612 | 35894.5 |
| putative membrane protein | HMPREF9720_1307 | Not Available | Negative | 2404790 - 2405674 | 30855.6 |
| bacterial transferase hexapeptide repeat protein | HMPREF9720_1308 | Not Available | Positive | 2405740 - 2406525 | 29543.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
