Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, substrate-binding protein | HMPREF9720_1289 | Not Available | Positive | 2388408 - 2389313 | 33655.1 |
| abc transporter, atp-binding protein | HMPREF9720_1290 | Not Available | Positive | 2389310 - 2390080 | 28444.4 |
| hypothetical protein | HMPREF9720_1291 | Not Available | Negative | 2390182 - 2390472 | 11261.6 |
| hypothetical protein | HMPREF9720_1292 | Not Available | Negative | 2390629 - 2391579 | 35360.5 |
| integrase core domain protein | HMPREF9720_1293 | Not Available | Negative | 2391703 - 2392344 | 25431.8 |
| hypothetical protein | HMPREF9720_1294 | Not Available | Negative | 2393074 - 2393370 | 11478.9 |
| hypothetical protein | HMPREF9720_1295 | Not Available | Negative | 2393372 - 2393509 | 5227.47 |
| dna mismatch repair protein muts | HMPREF9720_1296 | Not Available | Negative | 2394157 - 2396865 | 101390.0 |
| hypothetical protein | HMPREF9720_1297 | Not Available | Negative | 2396946 - 2397521 | 21860.4 |
| hypothetical protein | HMPREF9720_1298 | Not Available | Negative | 2397514 - 2398929 | 53704.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
