Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antioxidant, ahpc/tsa family | HMPREF9720_1279 | Not Available | Positive | 2379957 - 2380418 | 17330.4 |
| hypothetical protein | HMPREF9720_1280 | Not Available | Positive | 2380423 - 2380902 | 18103.0 |
| reca protein | HMPREF9720_1281 | Not Available | Positive | 2380931 - 2381947 | 36667.4 |
| rela/spot family protein | HMPREF9720_1282 | Not Available | Positive | 2381954 - 2384194 | 85066.5 |
| hypothetical protein | HMPREF9720_1283 | Not Available | Positive | 2384196 - 2384681 | 18129.0 |
| histidine triad domain protein | HMPREF9720_1284 | Not Available | Positive | 2384986 - 2385372 | 14438.6 |
| dna-binding helix-turn-helix protein | HMPREF9720_1285 | Not Available | Positive | 2386032 - 2386496 | 17244.7 |
| hypothetical protein | HMPREF9720_1286 | Not Available | Negative | 2386737 - 2387231 | 19081.6 |
| hypothetical protein | HMPREF9720_1287 | Not Available | Negative | 2387457 - 2387582 | 4796.01 |
| caax amino terminal protease family protein | HMPREF9720_1288 | Not Available | Positive | 2387621 - 2388415 | 29252.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
