Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1/pfpi family protein | HMPREF9720_1269 | Not Available | Positive | 2371200 - 2371796 | 21310.4 |
| o-methyltransferase | HMPREF9720_1270 | Not Available | Positive | 2371796 - 2372443 | 24445.5 |
| mazg nucleotide pyrophosphohydrolase domain protein | HMPREF9720_1271 | Not Available | Positive | 2372548 - 2372868 | 12162.5 |
| hypothetical protein | HMPREF9720_1272 | Not Available | Negative | 2373034 - 2373936 | 33843.7 |
| phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain ii | HMPREF9720_1273 | Not Available | Negative | 2374077 - 2375819 | 64716.5 |
| chromosomal replication initiator protein dnaa | HMPREF9720_1274 | Not Available | Positive | 2376076 - 2377458 | 51987.7 |
| hypothetical protein | HMPREF9720_1275 | Not Available | Positive | 2377493 - 2378047 | 20735.6 |
| hth domain protein | HMPREF9720_1276 | Not Available | Positive | 2378054 - 2378950 | 34416.2 |
| cupin domain protein | HMPREF9720_1277 | Not Available | Positive | 2379005 - 2379538 | 19206.8 |
| hypothetical protein | HMPREF9720_1278 | Not Available | Positive | 2379631 - 2379873 | 9343.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
