Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | HMPREF9720_1259 | Not Available | Positive | 2358115 - 2359491 | 48507.9 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9720_1260 | Not Available | Negative | 2359575 - 2361614 | 77267.2 |
| hypothetical protein | HMPREF9720_1261 | Not Available | Negative | 2361720 - 2361854 | 5135.33 |
| trna pseudouridine synthase a | HMPREF9720_1262 | Not Available | Negative | 2361928 - 2362701 | 29180.7 |
| putative aspartate ammonia-lyase | HMPREF9720_1263 | Not Available | Negative | 2362732 - 2364162 | 52335.4 |
| dihydrodipicolinate reductase | HMPREF9720_1264 | Not Available | Positive | 2364335 - 2365147 | 29472.5 |
| signal peptidase i | HMPREF9720_1265 | Not Available | Positive | 2365158 - 2366510 | 52244.6 |
| putative yigz family protein | HMPREF9720_1266 | Not Available | Positive | 2366512 - 2367120 | 22216.5 |
| excinuclease abc, a subunit | HMPREF9720_1267 | Not Available | Positive | 2367189 - 2369978 | 102695.0 |
| peptidase, m16 family | HMPREF9720_1268 | Not Available | Positive | 2369981 - 2371195 | 44903.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
