Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) | HMPREF9720_1239 | Not Available | Negative | 2338422 - 2339516 | 39583.0 |
| 4fe-4s binding domain protein | HMPREF9720_1240 | Not Available | Negative | 2339520 - 2339747 | 7813.7 |
| hypothetical protein | HMPREF9720_1241 | Not Available | Negative | 2339905 - 2340039 | 5339.65 |
| hypothetical protein | HMPREF9720_1242 | Not Available | Negative | 2340089 - 2341333 | 47375.0 |
| 4-phosphoerythronate dehydrogenase | HMPREF9720_1243 | Not Available | Negative | 2341358 - 2342362 | 36064.5 |
| phosphoserine transaminase | HMPREF9720_1244 | Not Available | Negative | 2342372 - 2343535 | 43370.1 |
| tigr00255 family protein | HMPREF9720_1245 | Not Available | Positive | 2343591 - 2344508 | 34633.8 |
| guanylate kinase | HMPREF9720_1246 | Not Available | Positive | 2344508 - 2345077 | 21353.4 |
| nicotinate-nucleotide adenylyltransferase | HMPREF9720_1247 | Not Available | Positive | 2345074 - 2345883 | 30916.8 |
| d-ala d-ala ligase n-terminal domain protein | HMPREF9720_1248 | Not Available | Positive | 2345886 - 2346872 | 36260.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
