Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation transport protein | HMPREF9720_1229 | Not Available | Negative | 2327856 - 2329301 | 52575.6 |
| hypothetical protein | HMPREF9720_1230 | Not Available | Negative | 2329307 - 2330086 | 29012.4 |
| trna methylthiotransferase yqev | HMPREF9720_1231 | Not Available | Negative | 2330122 - 2331420 | 47942.6 |
| abc 3 transport family protein | HMPREF9720_1232 | Not Available | Positive | 2331523 - 2332356 | 29092.5 |
| permease, yjgp/yjgq family | HMPREF9720_1233 | Not Available | Positive | 2332353 - 2333855 | 57017.0 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | HMPREF9720_1234 | Not Available | Positive | 2333830 - 2335053 | 44959.2 |
| methionyl-trna formyltransferase | HMPREF9720_1235 | Not Available | Positive | 2335111 - 2336082 | 35540.4 |
| antioxidant, ahpc/tsa family | HMPREF9720_1236 | Not Available | Negative | 2336145 - 2336849 | 26345.0 |
| 2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit | HMPREF9720_1237 | Not Available | Negative | 2337099 - 2337644 | 20027.7 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | HMPREF9720_1238 | Not Available | Negative | 2337655 - 2338416 | 27511.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
