Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-acetyltransferase | HMPREF9720_1219 | Not Available | Positive | 2315759 - 2316775 | 37265.1 |
| homoserine dehydrogenase | HMPREF9720_1220 | Not Available | Positive | 2316785 - 2317996 | 45337.5 |
| fibrobacter succinogene major paralogous domain protein | HMPREF9720_1221 | Not Available | Negative | 2318100 - 2319440 | 46482.3 |
| transporter, major facilitator family protein | HMPREF9720_1222 | Not Available | Negative | 2319513 - 2320715 | 44056.4 |
| hypothetical protein | HMPREF9720_1223 | Not Available | Negative | 2320813 - 2322279 | 51956.0 |
| zinc finger cdgsh type | HMPREF9720_1224 | Not Available | Positive | 2322444 - 2323211 | 28744.5 |
| iga peptidase m64 | HMPREF9720_1225 | Not Available | Negative | 2323452 - 2324729 | 48466.6 |
| hypothetical protein | HMPREF9720_1226 | Not Available | Negative | 2324800 - 2325771 | 34798.7 |
| nodulation efficiency protein d | HMPREF9720_1227 | Not Available | Negative | 2325784 - 2326299 | 18748.6 |
| sporulation and cell division repeat protein | HMPREF9720_1228 | Not Available | Negative | 2326300 - 2327826 | 56955.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
