Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-phosphoerythronate dehydrogenase | HMPREF9720_1209 | Not Available | Negative | 2302225 - 2303241 | 38001.4 |
| deoxyribose-phosphate aldolase | HMPREF9720_1210 | Not Available | Negative | 2303299 - 2304351 | 38251.7 |
| transcriptional regulator, arac family | HMPREF9720_1211 | Not Available | Negative | 2304442 - 2305290 | 32794.1 |
| efflux transporter, rnd family, mfp subunit | HMPREF9720_1212 | Not Available | Positive | 2305453 - 2306610 | 40822.8 |
| rnd transporter, hae1 family | HMPREF9720_1213 | Not Available | Positive | 2306614 - 2309793 | 114818.0 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | HMPREF9720_1214 | Not Available | Positive | 2309798 - 2311171 | 50490.1 |
| transcriptional regulator, tetr family | HMPREF9720_1215 | Not Available | Positive | 2311171 - 2311752 | 22611.3 |
| hypothetical protein | HMPREF9720_1216 | Not Available | Negative | 2311905 - 2314088 | 77796.3 |
| hypothetical protein | HMPREF9720_1218 | Not Available | Negative | 2314260 - 2314517 | 9865.17 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | HMPREF9720_1217 | Not Available | Positive | 2314476 - 2315759 | 46335.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
