Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1179 | Not Available | Positive | 2276265 - 2277920 | 63592.5 |
| hypothetical protein | HMPREF9720_1180 | Not Available | Positive | 2277930 - 2278109 | 6834.26 |
| hypothetical protein | HMPREF9720_1181 | Not Available | Negative | 2278126 - 2278644 | 20147.6 |
| transposase, is4 family | HMPREF9720_1182 | Not Available | Positive | 2278684 - 2279661 | 37342.0 |
| hypothetical protein | HMPREF9720_1183 | Not Available | Negative | 2279658 - 2280473 | 31557.3 |
| hypothetical protein | HMPREF9720_1184 | Not Available | Positive | 2280683 - 2281000 | 12485.9 |
| hypothetical protein | HMPREF9720_1185 | Not Available | Negative | 2281487 - 2281783 | 11481.9 |
| hypothetical protein | HMPREF9720_1186 | Not Available | Negative | 2281785 - 2281922 | 5236.48 |
| Trna-leu | Not Available | Not Available | Positive | 2282431 - 2282516 | Not Available |
| trna dimethylallyltransferase | HMPREF9720_1188 | Not Available | Negative | 2282559 - 2283464 | 34307.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
