Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome small subunit-dependent gtpase a | HMPREF9720_1133 | Not Available | Negative | 2262482 - 2263402 | 33862.3 |
| cvpa family protein | HMPREF9720_1134 | Not Available | Negative | 2263406 - 2263894 | 17694.1 |
| trag family protein | HMPREF9720_1171 | Not Available | Positive | 2264676 - 2266688 | 76179.5 |
| hypothetical protein | HMPREF9720_1172 | Not Available | Positive | 2266803 - 2268080 | 48142.9 |
| hypothetical protein | HMPREF9720_1173 | Not Available | Positive | 2268093 - 2268605 | 20206.2 |
| hypothetical protein | HMPREF9720_1174 | Not Available | Positive | 2268633 - 2269664 | 35539.3 |
| repeat protein | HMPREF9720_1175 | Not Available | Positive | 2269726 - 2272323 | 95307.9 |
| hypothetical protein | HMPREF9720_1176 | Not Available | Positive | 2272351 - 2273844 | 55797.8 |
| hypothetical protein | HMPREF9720_1177 | Not Available | Positive | 2273849 - 2275681 | 66882.6 |
| hypothetical protein | HMPREF9720_1178 | Not Available | Positive | 2275705 - 2276262 | 21091.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
