Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1367 | Not Available | Positive | 2251278 - 2252793 | 58449.5 |
| hypothetical protein | HMPREF9720_1368 | Not Available | Positive | 2252929 - 2253537 | 22714.0 |
| hypothetical protein | HMPREF9720_1369 | Not Available | Positive | 2253653 - 2255395 | 65947.5 |
| hypothetical protein | HMPREF9720_1370 | Not Available | Positive | 2255462 - 2255923 | 18006.7 |
| hypothetical protein | HMPREF9720_1371 | Not Available | Negative | 2256962 - 2257079 | 4587.55 |
| glycosyl hydrolase, family 92 | HMPREF9720_3045 | Not Available | Positive | 2257080 - 2257835 | 28747.6 |
| relaxase/mobilization nuclease domain protein | HMPREF9720_3046 | Not Available | Negative | 2258685 - 2259911 | 46686.3 |
| hypothetical protein | HMPREF9720_3047 | Not Available | Negative | 2259896 - 2260210 | 12300.1 |
| aminotransferase, class iii | HMPREF9720_1131 | Not Available | Negative | 2260613 - 2261815 | 43792.0 |
| rna methyltransferase, trmh family | HMPREF9720_1132 | Not Available | Negative | 2261818 - 2262501 | 25569.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
