Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase serb | HMPREF9720_0674 | Not Available | Negative | 2241304 - 2242524 | 45335.8 |
| transporter, small conductance mechanosensitive ion channel mscs family protein | HMPREF9720_0675 | Not Available | Positive | 2242619 - 2243542 | 34096.7 |
| hypothetical protein | HMPREF9720_0676 | Not Available | Positive | 2243554 - 2244006 | 16930.8 |
| hypothetical protein | HMPREF9720_0677 | Not Available | Positive | 2244028 - 2244432 | 14795.7 |
| methylglyoxal synthase | HMPREF9720_0678 | Not Available | Positive | 2244477 - 2245058 | 21799.2 |
| tim-barrel protein, nifr3 family | HMPREF9720_0679 | Not Available | Negative | 2245073 - 2246095 | 37911.2 |
| hypothetical protein | HMPREF9720_0680 | Not Available | Negative | 2246092 - 2247402 | 48444.0 |
| arginine--trna ligase | HMPREF9720_0681 | Not Available | Positive | 2247520 - 2249301 | 66874.6 |
| hypothetical protein | HMPREF9720_0682 | Not Available | Positive | 2249343 - 2249514 | 6295.65 |
| site-specific recombinase, phage integrase family | HMPREF9720_0001 | Not Available | Positive | 2249792 - 2251060 | 49385.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
