Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_0654 | Not Available | Negative | 2215461 - 2218670 | 118455.0 |
| methyltransferase domain protein | HMPREF9720_0655 | Not Available | Negative | 2220458 - 2221222 | 28989.8 |
| yitl protein | HMPREF9720_0656 | Not Available | Negative | 2221222 - 2222058 | 31426.7 |
| hydrolase coce/nond family protein | HMPREF9720_0657 | Not Available | Positive | 2222235 - 2224055 | 68219.6 |
| hydrolase, carbon-nitrogen family | HMPREF9720_0658 | Not Available | Positive | 2224127 - 2224978 | 32302.7 |
| hypothetical protein | HMPREF9720_0659 | Not Available | Positive | 2225266 - 2225580 | 11750.7 |
| excinuclease abc, a subunit | HMPREF9720_0660 | Not Available | Positive | 2225611 - 2228430 | 104484.0 |
| hypothetical protein | HMPREF9720_0661 | Not Available | Positive | 2228495 - 2229037 | 20502.8 |
| hypothetical protein | HMPREF9720_0662 | Not Available | Positive | 2229051 - 2229974 | 34301.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | HMPREF9720_0663 | Not Available | Negative | 2230053 - 2230535 | 17003.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
