Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase, yajc subunit | HMPREF9720_0644 | Not Available | Negative | 2204162 - 2204482 | 12199.2 |
| hypothetical protein | HMPREF9720_0645 | Not Available | Negative | 2204555 - 2204968 | 14909.0 |
| hypothetical protein | HMPREF9720_0647 | Not Available | Negative | 2204975 - 2205910 | 36034.4 |
| flavoprotein family protein | HMPREF9720_0646 | Not Available | Positive | 2205873 - 2207270 | 51737.0 |
| hypothetical protein | HMPREF9720_0648 | Not Available | Positive | 2207276 - 2207788 | 19159.4 |
| atp:cob(i)alamin adenosyltransferase | HMPREF9720_0649 | Not Available | Positive | 2207785 - 2208336 | 20172.3 |
| hypothetical protein | HMPREF9720_0650 | Not Available | Positive | 2208500 - 2208721 | 8652.77 |
| ser/thr phosphatase family protein | HMPREF9720_0651 | Not Available | Negative | 2209156 - 2211744 | 96675.6 |
| hypothetical protein | HMPREF9720_0652 | Not Available | Negative | 2211824 - 2213827 | 73554.7 |
| hypothetical protein | HMPREF9720_0653 | Not Available | Negative | 2213921 - 2215453 | 57883.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
