Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0634 | Not Available | Positive | 2197619 - 2198347 | 27520.5 |
| hypothetical protein | HMPREF9720_0635 | Not Available | Negative | 2198539 - 2199114 | 22240.4 |
| thioesterase family protein | HMPREF9720_0636 | Not Available | Positive | 2199186 - 2199560 | 12600.2 |
| vanw-like protein | HMPREF9720_0637 | Not Available | Positive | 2199563 - 2200426 | 33840.4 |
| citrate transporter | HMPREF9720_0638 | Not Available | Negative | 2200494 - 2201831 | 48488.0 |
| hypothetical protein | HMPREF9720_0639 | Not Available | Negative | 2201842 - 2202342 | 18588.3 |
| hypothetical protein | HMPREF9720_0640 | Not Available | Negative | 2202423 - 2202788 | 12746.3 |
| Trna-gln | Not Available | Not Available | Positive | 2202921 - 2202991 | Not Available |
| transglycosylase associated protein | HMPREF9720_0642 | Not Available | Negative | 2203258 - 2203509 | 8518.85 |
| conserved hypothetical protein tigr03905 | HMPREF9720_0643 | Not Available | Negative | 2203577 - 2203825 | 8580.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
