Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna/rna non-specific endonuclease | HMPREF9720_0614 | Not Available | Positive | 2172228 - 2173445 | 45123.4 |
| endonuclease/exonuclease/phosphatase family protein | HMPREF9720_0615 | Not Available | Positive | 2173466 - 2174500 | 38999.9 |
| hypothetical protein | HMPREF9720_0616 | Not Available | Positive | 2174517 - 2177276 | 104194.0 |
| hypothetical protein | HMPREF9720_0617 | Not Available | Positive | 2177303 - 2178328 | 37966.1 |
| arylsulfatase | HMPREF9720_0618 | Not Available | Negative | 2178399 - 2180456 | 77973.4 |
| peptidase m16 inactive domain protein | HMPREF9720_0619 | Not Available | Negative | 2180567 - 2183380 | 105556.0 |
| hypothetical protein | HMPREF9720_0620 | Not Available | Negative | 2183421 - 2183642 | 8176.05 |
| hypothetical protein | HMPREF9720_0621 | Not Available | Negative | 2183703 - 2184392 | 25789.9 |
| hypothetical protein | HMPREF9720_0622 | Not Available | Negative | 2184537 - 2185148 | 22392.5 |
| acyl-acp thioesterase | HMPREF9720_0623 | Not Available | Positive | 2185248 - 2185976 | 27437.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
