Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease recj | HMPREF9720_2430 | Not Available | Positive | 207829 - 209595 | 65840.4 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9720_2431 | Not Available | Positive | 209750 - 212899 | 120763.0 |
| nitroreductase family protein | HMPREF9720_2432 | Not Available | Negative | 212914 - 213441 | 19382.2 |
| hypothetical protein | HMPREF9720_2433 | Not Available | Positive | 213519 - 214358 | 31856.1 |
| gtp cyclohydrolase i | HMPREF9720_2435 | Not Available | Positive | 215087 - 215695 | 23456.5 |
| pa14 domain protein | HMPREF9720_0983 | Not Available | Positive | 216032 - 217001 | 36133.1 |
| Trna-ala | Not Available | Not Available | Positive | 217110 - 217186 | Not Available |
| thioredoxin | HMPREF9720_0985 | Not Available | Positive | 217762 - 218121 | 13760.8 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | HMPREF9720_0986 | Not Available | Negative | 218630 - 219661 | 37808.1 |
| 2-oxoacid:acceptor oxidoreductase, alpha subunit | HMPREF9720_0987 | Not Available | Negative | 219666 - 221510 | 66670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
