Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fes assembly atpase sufc | HMPREF9720_0594 | Not Available | Positive | 2145946 - 2146698 | 27670.6 |
| sufb/sufd domain protein | HMPREF9720_0595 | Not Available | Positive | 2146695 - 2147516 | 29654.4 |
| cysteine desulfurase, sufs subfamily | HMPREF9720_0596 | Not Available | Positive | 2147519 - 2148736 | 44108.9 |
| dtmp kinase | HMPREF9720_0597 | Not Available | Positive | 2148787 - 2149476 | 25466.2 |
| doxx family protein | HMPREF9720_0598 | Not Available | Positive | 2149469 - 2150575 | 41896.7 |
| efflux transporter, rnd family, mfp subunit | HMPREF9720_0599 | Not Available | Positive | 2150637 - 2151665 | 37486.7 |
| rnd transporter, hae1/hme family, permease protein | HMPREF9720_0600 | Not Available | Positive | 2151673 - 2154705 | 111190.0 |
| outer membrane efflux protein | HMPREF9720_0601 | Not Available | Positive | 2154702 - 2155946 | 46184.6 |
| osmc-like protein | HMPREF9720_0602 | Not Available | Negative | 2156008 - 2156415 | 15045.3 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9720_0603 | Not Available | Negative | 2156463 - 2157887 | 54074.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
