Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulokinase | HMPREF9720_0574 | Not Available | Positive | 2125073 - 2126698 | 58404.5 |
| putative queuosine biosynthesis protein qued | HMPREF9720_0575 | Not Available | Positive | 2126916 - 2127386 | 17457.9 |
| hypothetical protein | HMPREF9720_0576 | Not Available | Negative | 2128207 - 2128602 | 15518.8 |
| hypothetical protein | HMPREF9720_0577 | Not Available | Positive | 2129327 - 2129845 | 19543.0 |
| site-specific recombinase, phage integrase family | HMPREF9720_0578 | Not Available | Negative | 2130389 - 2131606 | 47373.5 |
| rna methyltransferase, trmh family | HMPREF9720_0579 | Not Available | Positive | 2131900 - 2132436 | 19107.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | HMPREF9720_0580 | Not Available | Positive | 2132682 - 2133497 | 29356.6 |
| inosine-5'-monophosphate dehydrogenase | HMPREF9720_0581 | Not Available | Positive | 2133726 - 2135228 | 53776.9 |
| hypothetical protein | HMPREF9720_0582 | Not Available | Positive | 2135231 - 2135563 | 12330.0 |
| gmp synthase (glutamine-hydrolyzing) domain protein | HMPREF9720_0583 | Not Available | Positive | 2135691 - 2137250 | 57007.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
