Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_0564 | Not Available | Negative | 2110357 - 2113515 | 117357.0 |
| arabinose isomerase | HMPREF9720_0565 | Not Available | Negative | 2113549 - 2115324 | 65537.7 |
| glycosyl hydrolase family 32 | HMPREF9720_0566 | Not Available | Negative | 2115344 - 2117323 | 73409.9 |
| transporter, sss family | HMPREF9720_0567 | Not Available | Negative | 2117320 - 2118807 | 53917.9 |
| putative dihydrodipicolinate synthase | HMPREF9720_0568 | Not Available | Negative | 2118839 - 2119750 | 33242.3 |
| hypothetical protein | HMPREF9720_0569 | Not Available | Negative | 2119774 - 2120649 | 32419.8 |
| fg-gap repeat protein | HMPREF9720_0570 | Not Available | Negative | 2120646 - 2122466 | 67825.1 |
| hypothetical protein | HMPREF9720_0571 | Not Available | Negative | 2122522 - 2122698 | 5875.15 |
| transcriptional regulator, laci family | HMPREF9720_0572 | Not Available | Negative | 2122748 - 2123878 | 42867.5 |
| hypothetical protein | HMPREF9720_0573 | Not Available | Positive | 2123976 - 2125061 | 39087.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
