Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 2 family protein | HMPREF9720_0544 | Not Available | Positive | 2083992 - 2085005 | 38027.6 |
| transcriptional regulator, effector binding domain protein | HMPREF9720_0545 | Not Available | Positive | 2085065 - 2085928 | 32226.7 |
| glutamine--trna ligase | HMPREF9720_0546 | Not Available | Negative | 2086088 - 2087764 | 64628.7 |
| hypothetical protein | HMPREF9720_0547 | Not Available | Negative | 2087785 - 2088849 | 40695.3 |
| hypothetical protein | HMPREF9720_0548 | Not Available | Negative | 2089202 - 2089672 | 18085.2 |
| hypothetical protein | HMPREF9720_0549 | Not Available | Negative | 2089769 - 2089963 | 7392.89 |
| hypothetical protein | HMPREF9720_0550 | Not Available | Negative | 2090084 - 2090350 | 9987.23 |
| peptidase, s49 (protease iv) family protein | HMPREF9720_0551 | Not Available | Positive | 2090429 - 2091001 | 20610.0 |
| ser/thr phosphatase family protein | HMPREF9720_0552 | Not Available | Negative | 2091081 - 2092658 | 59812.9 |
| bnr/asp-box repeat protein | HMPREF9720_0553 | Not Available | Negative | 2092672 - 2094687 | 75450.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
