Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | HMPREF9720_0534 | Not Available | Positive | 2070809 - 2071648 | 30790.4 |
| alkaline phosphatase family protein | HMPREF9720_0535 | Not Available | Positive | 2071645 - 2073588 | 71562.9 |
| hypothetical protein | HMPREF9720_0536 | Not Available | Positive | 2073599 - 2075212 | 62142.6 |
| ser/thr phosphatase family protein | HMPREF9720_0537 | Not Available | Positive | 2075250 - 2076233 | 35916.2 |
| rok family protein | HMPREF9720_0538 | Not Available | Positive | 2076244 - 2077065 | 29392.4 |
| glycosyl hydrolase family 20, catalytic domain protein | HMPREF9720_0539 | Not Available | Positive | 2077148 - 2078791 | 61752.2 |
| hypothetical protein | HMPREF9720_0540 | Not Available | Positive | 2078947 - 2080959 | 68575.4 |
| s-adenosylmethionine-dependent methyltransferase, yral family | HMPREF9720_0541 | Not Available | Positive | 2080964 - 2081671 | 25979.4 |
| putative tigr00341 family protein | HMPREF9720_0542 | Not Available | Positive | 2081682 - 2083073 | 51506.5 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | HMPREF9720_0543 | Not Available | Positive | 2083085 - 2084005 | 37188.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
