Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, mota/tolq/exbb proton channel family protein | HMPREF9720_2420 | Not Available | Positive | 200112 - 200870 | 26808.1 |
| hypothetical protein | HMPREF9720_2421 | Not Available | Positive | 200902 - 201321 | 14710.5 |
| hypothetical protein | HMPREF9720_2422 | Not Available | Positive | 201336 - 201941 | 22775.5 |
| hypothetical protein | HMPREF9720_2423 | Not Available | Positive | 201945 - 202415 | 17427.5 |
| ribonuclease hii | HMPREF9720_2424 | Not Available | Negative | 202527 - 203138 | 23006.6 |
| hypothetical protein | HMPREF9720_2425 | Not Available | Positive | 203634 - 204614 | 34658.8 |
| transcriptional regulator, arac family | HMPREF9720_2426 | Not Available | Positive | 204773 - 205690 | 35781.7 |
| hypothetical protein | HMPREF9720_2427 | Not Available | Positive | 205904 - 206122 | 7673.04 |
| lipoyl synthase | HMPREF9720_2428 | Not Available | Positive | 206178 - 207065 | 33139.2 |
| lipoyl(octanoyl) transferase | HMPREF9720_2429 | Not Available | Positive | 207062 - 207820 | 27362.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
