Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-methyltetrahydrofolate--homocysteine methyltransferase | HMPREF9720_0144 | Not Available | Negative | 2017728 - 2021339 | 131826.0 |
| glutamine cyclotransferase | HMPREF9720_0145 | Not Available | Negative | 2021340 - 2022131 | 29048.4 |
| trigger factor | HMPREF9720_0146 | Not Available | Positive | 2022461 - 2023786 | 50678.3 |
| endopeptidase clp | HMPREF9720_0147 | Not Available | Positive | 2024019 - 2024687 | 24310.4 |
| atp-dependent clp protease, atp-binding subunit clpx | HMPREF9720_0148 | Not Available | Positive | 2024687 - 2025964 | 47145.3 |
| site-specific recombinase, phage integrase family | HMPREF9720_0498 | Not Available | Negative | 2026084 - 2027265 | 45720.9 |
| Trna-lys | Not Available | Not Available | Positive | 2027431 - 2027506 | Not Available |
| glycosyl hydrolase family 2, sugar binding domain protein | HMPREF9720_0500 | Not Available | Negative | 2027645 - 2028949 | 48632.5 |
| type i restriction enzyme hsdr protein n-terminal domain protein | HMPREF9720_0501 | Not Available | Positive | 2029075 - 2029527 | 17103.7 |
| lyttr dna-binding domain protein | HMPREF9720_0502 | Not Available | Negative | 2029522 - 2030268 | 28403.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
