Alistipes sp. HGB5

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. HGB5 is a Gram-negative bacterium characterized by the presence of flagella, which likely contribute to its motility. This organism is notable for having a single replicon, indicating a straightforward genomic structure that may have implications for its replication and genetic stability. The presence of flagella in Alistipes sp. HGB5 suggests adaptations for navigating its environment, which could be essential for nutrient acquisition and colonization within its ecological niche. This motility may also play a role in interactions with other microorganisms, potentially influencing community dynamics in its habitat. The genomic data for Alistipes sp. HGB5 can be accessed from the accession number AENZ00000000.1. This information provides a basis for further exploration of its genetic makeup and functional capabilities, which could reveal additional insights into its biology. Overall, the traits of Alistipes sp. HGB5 highlight its potential ecological role as a motile, Gram-negative bacterium that may contribute to microbial diversity and functionality in its environment. Understanding such traits can enhance our knowledge of microbial ecology and the specific roles different species play in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. HGB5
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. HGB5 contig00005, whole genome shotgun sequence.

Gene Summary

Adenine Count

740743 bp

Thymine Count

730936 bp

Guanine Count

993821 bp

Cytosine Count

999115 bp

Genome Length

3464615 bp

Protein-coding Genes

2946 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-methyltetrahydrofolate--homocysteine methyltransferaseHMPREF9720_0144Not AvailableNegative2017728 - 2021339131826.0
glutamine cyclotransferaseHMPREF9720_0145Not AvailableNegative2021340 - 202213129048.4
trigger factorHMPREF9720_0146Not AvailablePositive2022461 - 202378650678.3
endopeptidase clpHMPREF9720_0147Not AvailablePositive2024019 - 202468724310.4
atp-dependent clp protease, atp-binding subunit clpxHMPREF9720_0148Not AvailablePositive2024687 - 202596447145.3
site-specific recombinase, phage integrase familyHMPREF9720_0498Not AvailableNegative2026084 - 202726545720.9
Trna-lysNot AvailableNot AvailablePositive2027431 - 2027506Not Available
glycosyl hydrolase family 2, sugar binding domain proteinHMPREF9720_0500Not AvailableNegative2027645 - 202894948632.5
type i restriction enzyme hsdr protein n-terminal domain proteinHMPREF9720_0501Not AvailablePositive2029075 - 202952717103.7
lyttr dna-binding domain proteinHMPREF9720_0502Not AvailableNegative2029522 - 203026828403.1

Displaying genes 1771 – 1780 of 3009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.