Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecorii c-terminal domain protein | HMPREF9720_0104 | Not Available | Positive | 1964775 - 1965956 | 45670.2 |
| site-specific recombinase, phage integrase family | HMPREF9720_0105 | Not Available | Negative | 1966426 - 1967328 | 35391.9 |
| Trna-arg | Not Available | Not Available | Positive | 1967501 - 1967577 | Not Available |
| antioxidant, ahpc/tsa family | HMPREF9720_0107 | Not Available | Negative | 1967711 - 1968757 | 37848.2 |
| crossover junction endodeoxyribonuclease ruvc | HMPREF9720_0108 | Not Available | Negative | 1968800 - 1969390 | 21255.8 |
| antioxidant, ahpc/tsa family | HMPREF9720_0109 | Not Available | Negative | 1969483 - 1970538 | 38816.8 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | HMPREF9720_0110 | Not Available | Negative | 1970556 - 1971590 | 36579.0 |
| pantetheine-phosphate adenylyltransferase | HMPREF9720_0111 | Not Available | Negative | 1971602 - 1972081 | 17595.0 |
| hypothetical protein | HMPREF9720_0112 | Not Available | Negative | 1972131 - 1972724 | 22863.9 |
| hypothetical protein | HMPREF9720_0113 | Not Available | Negative | 1972776 - 1973504 | 26343.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
