Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s binding domain protein | HMPREF9720_0094 | Not Available | Negative | 1955928 - 1956131 | 7309.02 |
| thioredoxin | HMPREF9720_0095 | Not Available | Negative | 1956139 - 1956603 | 16865.3 |
| site-specific recombinase, phage integrase family | HMPREF9720_0096 | Not Available | Positive | 1957083 - 1958471 | 54502.8 |
| hypothetical protein | HMPREF9720_0097 | Not Available | Positive | 1958917 - 1959054 | 5228.46 |
| sel1 repeat protein | HMPREF9720_0098 | Not Available | Positive | 1959483 - 1960796 | 48948.0 |
| hypothetical protein | HMPREF9720_0099 | Not Available | Negative | 1960785 - 1961021 | 9219.38 |
| hypothetical protein | HMPREF9720_0100 | Not Available | Positive | 1961248 - 1961442 | 7392.02 |
| hypothetical protein | HMPREF9720_0101 | Not Available | Positive | 1962057 - 1962965 | 35771.8 |
| dna mismatch endonuclease vsr | HMPREF9720_0102 | Not Available | Positive | 1963026 - 1963448 | 16529.3 |
| dna (cytosine-5-)-methyltransferase | HMPREF9720_0103 | Not Available | Positive | 1963493 - 1964788 | 49170.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
