Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux abc transporter, permease protein | HMPREF9720_0052 | Not Available | Negative | 1890026 - 1891282 | 46303.5 |
| abc transporter, atp-binding protein | HMPREF9720_0053 | Not Available | Negative | 1891279 - 1891968 | 25110.4 |
| tonb-dependent receptor | HMPREF9720_0054 | Not Available | Positive | 1892409 - 1895237 | 103737.0 |
| hypothetical protein | HMPREF9720_0055 | Not Available | Positive | 1895243 - 1896472 | 45001.3 |
| hypothetical protein | HMPREF9720_0056 | Not Available | Positive | 1896476 - 1897975 | 56337.0 |
| fibrobacter succinogene major paralogous domain protein | HMPREF9720_0057 | Not Available | Positive | 1898008 - 1899591 | 56101.9 |
| 4fe-4s binding domain protein | HMPREF9720_0058 | Not Available | Positive | 1899635 - 1901587 | 72864.1 |
| hypothetical protein | HMPREF9720_0059 | Not Available | Positive | 1901629 - 1903815 | 82953.6 |
| had hydrolase, family ia, variant 1 | HMPREF9720_0060 | Not Available | Negative | 1904046 - 1904693 | 23756.3 |
| acetyl-coa hydrolase/transferase | HMPREF9720_0061 | Not Available | Negative | 1904850 - 1906142 | 46108.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
