Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha-1,2-mannosidase | HMPREF9720_0032 | Not Available | Positive | 1865101 - 1867236 | 79331.2 |
| hypothetical protein | HMPREF9720_0033 | Not Available | Negative | 1867478 - 1867738 | 9655.32 |
| secondary thiamine-phosphate synthase enzyme | HMPREF9720_0034 | Not Available | Negative | 1867823 - 1868233 | 15214.2 |
| doxx family protein | HMPREF9720_0035 | Not Available | Positive | 1868398 - 1868838 | 15785.7 |
| trna modification gtpase trme | HMPREF9720_0036 | Not Available | Negative | 1869019 - 1870449 | 50747.2 |
| transglycosylase slt domain protein | HMPREF9720_0037 | Not Available | Negative | 1870451 - 1871833 | 51603.3 |
| hypothetical protein | HMPREF9720_0038 | Not Available | Negative | 1871837 - 1872997 | 43789.6 |
| parb-like protein | HMPREF9720_0039 | Not Available | Negative | 1873001 - 1873876 | 32776.5 |
| cobq/cobb/mind/para nucleotide binding domain protein | HMPREF9720_0040 | Not Available | Negative | 1873889 - 1874713 | 30352.9 |
| caax amino terminal protease family protein | HMPREF9720_0041 | Not Available | Positive | 1874755 - 1875687 | 33643.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
