Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0012 | Not Available | Negative | 1846390 - 1846518 | 4898.04 |
| putative glutamate/gamma-aminobutyrate antiporter | HMPREF9720_0013 | Not Available | Negative | 1846615 - 1848081 | 52830.0 |
| hypothetical protein | HMPREF9720_0014 | Not Available | Negative | 1848372 - 1848536 | 5617.81 |
| hypothetical protein | HMPREF9720_0015 | Not Available | Negative | 1848539 - 1850386 | 65391.3 |
| adenylosuccinate lyase | HMPREF9720_0016 | Not Available | Negative | 1850861 - 1852207 | 50581.7 |
| hypothetical protein | HMPREF9720_0017 | Not Available | Positive | 1852307 - 1852723 | 15429.1 |
| hypothetical protein | HMPREF9720_0018 | Not Available | Positive | 1852727 - 1853470 | 26889.9 |
| putative phage tail component domain protein | HMPREF9720_0019 | Not Available | Positive | 1853467 - 1854222 | 28442.1 |
| glyceraldehyde-3-phosphate dehydrogenase, type i | HMPREF9720_0020 | Not Available | Positive | 1854340 - 1855356 | 36354.5 |
| putative acr, cog1399 | HMPREF9720_0021 | Not Available | Positive | 1856059 - 1856592 | 20140.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
