Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | HMPREF9720_0002 | Not Available | Positive | 1831613 - 1832706 | 40580.0 |
| hypothetical protein | HMPREF9720_0003 | Not Available | Negative | 1832703 - 1832912 | 7928.47 |
| endonuclease/exonuclease/phosphatase family protein | HMPREF9720_0004 | Not Available | Negative | 1833002 - 1833895 | 33906.6 |
| endonuclease/exonuclease/phosphatase family protein | HMPREF9720_0005 | Not Available | Negative | 1833906 - 1834814 | 34786.8 |
| hypothetical protein | HMPREF9720_0006 | Not Available | Negative | 1834845 - 1837160 | 85418.4 |
| hypothetical protein | HMPREF9720_0007 | Not Available | Negative | 1837180 - 1839618 | 88899.6 |
| tetratricopeptide repeat protein | HMPREF9720_0008 | Not Available | Negative | 1839629 - 1841125 | 56480.2 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_0009 | Not Available | Negative | 1841144 - 1844635 | 129193.0 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_0010 | Not Available | Negative | 1844699 - 1845694 | 38208.1 |
| rna polymerase sigma-70 factor | HMPREF9720_0011 | Not Available | Negative | 1845828 - 1846385 | 21571.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
