Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fah family protein | HMPREF9720_2630 | Not Available | Positive | 1786210 - 1786923 | 26434.4 |
| septum formation protein maf | HMPREF9720_2631 | Not Available | Positive | 1787129 - 1787722 | 22142.7 |
| hypothetical protein | HMPREF9720_2632 | Not Available | Positive | 1787722 - 1789710 | 74242.5 |
| peptidase, s41 family | HMPREF9720_2633 | Not Available | Positive | 1789750 - 1791273 | 55511.0 |
| Trna-leu | Not Available | Not Available | Positive | 1791483 - 1791570 | Not Available |
| hypothetical protein | HMPREF9720_2635 | Not Available | Negative | 1791812 - 1792873 | 40365.4 |
| hypothetical protein | HMPREF9720_2636 | Not Available | Positive | 1792922 - 1794112 | 46264.0 |
| hypothetical protein | HMPREF9720_2637 | Not Available | Positive | 1794372 - 1794857 | 19345.6 |
| dna binding domain, excisionase family | HMPREF9720_2638 | Not Available | Positive | 1795101 - 1795511 | 15890.2 |
| hypothetical protein | HMPREF9720_2639 | Not Available | Positive | 1795511 - 1796884 | 51829.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
