Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mg chelatase-like protein | HMPREF9720_2610 | Not Available | Negative | 1765816 - 1767354 | 54247.6 |
| replicative dna helicase | HMPREF9720_2611 | Not Available | Negative | 1767510 - 1769075 | 57159.2 |
| comf family protein | HMPREF9720_2612 | Not Available | Negative | 1769240 - 1769962 | 26914.7 |
| primosomal protein n' | HMPREF9720_2613 | Not Available | Negative | 1769946 - 1772201 | 83687.9 |
| hypothetical protein | HMPREF9720_2614 | Not Available | Negative | 1772201 - 1773097 | 32556.0 |
| radical sam protein, tigr01212 family | HMPREF9720_2615 | Not Available | Negative | 1773171 - 1774124 | 36184.2 |
| dna/rna non-specific endonuclease | HMPREF9720_2616 | Not Available | Negative | 1774127 - 1775650 | 54425.1 |
| d-tyrosyl-trna(tyr) deacylase | HMPREF9720_2617 | Not Available | Negative | 1775665 - 1776120 | 16541.0 |
| pseudouridine synthase, rlua family | HMPREF9720_2618 | Not Available | Negative | 1776134 - 1776820 | 25734.8 |
| putative cytidine deaminase | HMPREF9720_2619 | Not Available | Negative | 1776924 - 1777379 | 16609.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
