Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat pathway signal sequence domain protein | HMPREF9720_2590 | Not Available | Positive | 1741002 - 1743491 | 90862.2 |
| efflux abc transporter, permease protein | HMPREF9720_2591 | Not Available | Positive | 1743496 - 1744377 | 31911.6 |
| hypothetical protein | HMPREF9720_2592 | Not Available | Positive | 1744378 - 1744635 | 9532.96 |
| putative undecaprenyl-diphosphatase uppp | HMPREF9720_2593 | Not Available | Positive | 1744695 - 1745486 | 28129.3 |
| trna pseudouridine synthase b | HMPREF9720_2594 | Not Available | Positive | 1745486 - 1746202 | 27042.8 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | HMPREF9720_2595 | Not Available | Positive | 1746267 - 1747316 | 39976.0 |
| starch synthase catalytic domain protein | HMPREF9720_2596 | Not Available | Positive | 1747439 - 1748245 | 30578.5 |
| hypothetical protein | HMPREF9720_2597 | Not Available | Positive | 1748229 - 1749911 | 62509.7 |
| dna topoisomerase i | HMPREF9720_2598 | Not Available | Positive | 1749989 - 1752286 | 85736.3 |
| peptidase c1-like family | HMPREF9720_2599 | Not Available | Positive | 1752317 - 1753525 | 45612.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
