Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | HMPREF9720_2580 | Not Available | Negative | 1730975 - 1731583 | 23642.7 |
| hypothetical protein | HMPREF9720_2581 | Not Available | Positive | 1731747 - 1732754 | 37773.0 |
| phospholipase d domain protein | HMPREF9720_2582 | Not Available | Positive | 1732794 - 1734209 | 53621.0 |
| response regulator receiver domain protein | HMPREF9720_2583 | Not Available | Negative | 1734304 - 1734939 | 23307.2 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9720_2584 | Not Available | Negative | 1734944 - 1735915 | 36502.6 |
| 5'/3'-nucleotidase sure | HMPREF9720_2585 | Not Available | Negative | 1735950 - 1736723 | 28566.8 |
| hypothetical protein | HMPREF9720_2586 | Not Available | Positive | 1736784 - 1737179 | 14223.6 |
| ribosomal protein l19 | HMPREF9720_2587 | Not Available | Positive | 1737377 - 1737757 | 14260.6 |
| transporter, major facilitator family protein | HMPREF9720_2588 | Not Available | Negative | 1738409 - 1739707 | 45505.9 |
| polyprenyl synthetase | HMPREF9720_2589 | Not Available | Negative | 1739745 - 1740866 | 40643.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
