Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2569 | Not Available | Negative | 1716319 - 1718325 | 75183.8 |
| hypothetical protein | HMPREF9720_2570 | Not Available | Negative | 1718322 - 1718507 | 7387.31 |
| hypothetical protein | HMPREF9720_2571 | Not Available | Positive | 1718650 - 1720263 | 59224.7 |
| glycoside hydrolase, family 2 | HMPREF9720_2572 | Not Available | Positive | 1720266 - 1722836 | 98222.7 |
| putative alpha,alpha-trehalase | HMPREF9720_2679 | Not Available | Positive | 1722856 - 1724217 | 51609.6 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_2573 | Not Available | Positive | 1724214 - 1727291 | 113936.0 |
| susd family protein | HMPREF9720_2576 | Not Available | Positive | 1727304 - 1728788 | 55945.5 |
| hypothetical protein | HMPREF9720_2577 | Not Available | Positive | 1728800 - 1729699 | 33119.0 |
| translation elongation factor p | HMPREF9720_2578 | Not Available | Negative | 1729798 - 1730364 | 21209.3 |
| polyprenyl p-hydroxybenzoate and phenylacrylic acid decarboxylase | HMPREF9720_2579 | Not Available | Negative | 1730425 - 1730973 | 19399.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
