Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l4 | HMPREF9720_2539 | Not Available | Negative | 1686157 - 1686783 | 22468.4 |
| 50s ribosomal protein l3 | HMPREF9720_2540 | Not Available | Negative | 1686785 - 1687399 | 21916.6 |
| ribosomal protein s10 | HMPREF9720_2541 | Not Available | Negative | 1687472 - 1687777 | 11399.1 |
| translation elongation factor g | HMPREF9720_2542 | Not Available | Negative | 1687786 - 1689900 | 77325.3 |
| ribosomal protein s7 | HMPREF9720_2543 | Not Available | Negative | 1689917 - 1690393 | 18151.4 |
| ribosomal protein s12 | HMPREF9720_2544 | Not Available | Negative | 1690434 - 1690814 | 13984.1 |
| hypothetical protein | HMPREF9720_2545 | Not Available | Positive | 1691123 - 1691665 | 18931.6 |
| leucine--trna ligase | HMPREF9720_2546 | Not Available | Positive | 1691990 - 1694746 | 105814.0 |
| baat/acyl-coa thioester hydrolase c-terminal domain protein | HMPREF9720_2547 | Not Available | Positive | 1694769 - 1695644 | 31612.7 |
| peptide chain release factor 1 | HMPREF9720_2548 | Not Available | Positive | 1695763 - 1696848 | 40821.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
