Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | HMPREF9720_2390 | Not Available | Positive | 168553 - 169434 | 33859.9 |
| radical sam domain protein | HMPREF9720_2391 | Not Available | Positive | 169404 - 170906 | 56050.5 |
| hypothetical protein | HMPREF9720_2392 | Not Available | Positive | 170882 - 171322 | 15741.2 |
| acyl-coa thioester hydrolase, ybgc/ybaw family | HMPREF9720_2393 | Not Available | Positive | 171319 - 171765 | 17030.3 |
| beta-ketoacyl synthase, c-terminal domain protein | HMPREF9720_2394 | Not Available | Positive | 171750 - 173714 | 68846.8 |
| putative acyl carrier protein | HMPREF9720_2395 | Not Available | Positive | 173720 - 173974 | 9386.33 |
| beta-ketoacyl synthase, c-terminal domain protein | HMPREF9720_2396 | Not Available | Positive | 173971 - 175134 | 39944.3 |
| hypothetical protein | HMPREF9720_2397 | Not Available | Positive | 175131 - 176033 | 31831.6 |
| polysaccharide deacetylase | HMPREF9720_2398 | Not Available | Positive | 176024 - 176710 | 25686.3 |
| hypothetical protein | HMPREF9720_2399 | Not Available | Positive | 176707 - 177321 | 23204.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
