Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2306 | Not Available | Negative | 1671309 - 1671521 | 7984.44 |
| hypothetical protein | HMPREF9720_2307 | Not Available | Negative | 1671531 - 1671680 | 5892.19 |
| ribosomal protein l17 | HMPREF9720_2511 | Not Available | Negative | 1671787 - 1672392 | 21857.8 |
| dna-directed rna polymerase, alpha subunit | HMPREF9720_2512 | Not Available | Negative | 1672395 - 1673387 | 37000.9 |
| ribosomal protein s4 | HMPREF9720_2513 | Not Available | Negative | 1673412 - 1674020 | 22624.4 |
| 30s ribosomal protein s11 | HMPREF9720_2514 | Not Available | Negative | 1674070 - 1674459 | 13729.8 |
| 30s ribosomal protein s13 | HMPREF9720_2515 | Not Available | Negative | 1674473 - 1674853 | 14013.3 |
| ribosomal protein l36 | HMPREF9720_2516 | Not Available | Negative | 1674891 - 1675016 | 4869.43 |
| translation initiation factor if-1 | HMPREF9720_2517 | Not Available | Negative | 1675028 - 1675246 | 8207.17 |
| methionine aminopeptidase, type i | HMPREF9720_2518 | Not Available | Negative | 1675253 - 1676029 | 28150.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
