Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | HMPREF9720_0900 | Not Available | Negative | 1616944 - 1618014 | 40859.1 |
| efflux transporter, rnd family, mfp subunit | HMPREF9720_0901 | Not Available | Positive | 1618014 - 1619024 | 35502.5 |
| rnd transporter, hae1/hme family, permease protein | HMPREF9720_0902 | Not Available | Positive | 1619024 - 1622074 | 112715.0 |
| outer membrane efflux protein | HMPREF9720_0903 | Not Available | Positive | 1622071 - 1623351 | 47617.0 |
| rna polymerase sigma-70 factor | HMPREF9720_0904 | Not Available | Positive | 1623785 - 1624321 | 21786.0 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_0905 | Not Available | Positive | 1624504 - 1625490 | 36882.9 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_0906 | Not Available | Positive | 1625648 - 1629190 | 129262.0 |
| hypothetical protein | HMPREF9720_0907 | Not Available | Positive | 1629229 - 1630737 | 56183.1 |
| fibrobacter succinogene major paralogous domain protein | HMPREF9720_0908 | Not Available | Positive | 1630787 - 1632646 | 66751.0 |
| glycerophosphodiester phosphodiesterase family protein | HMPREF9720_0909 | Not Available | Positive | 1632708 - 1633649 | 33799.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
