Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2977 | Not Available | Negative | 1597489 - 1597899 | 14854.1 |
| phosphoenolpyruvate carboxykinase (atp) | HMPREF9720_0881 | Not Available | Positive | 1598139 - 1599746 | 59769.6 |
| hypothetical protein | HMPREF9720_0882 | Not Available | Negative | 1600137 - 1600787 | 25075.4 |
| ribosome recycling factor | HMPREF9720_0883 | Not Available | Negative | 1600876 - 1601433 | 20651.8 |
| antioxidant, ahpc/tsa family | HMPREF9720_0884 | Not Available | Negative | 1601436 - 1602002 | 20860.2 |
| ump kinase | HMPREF9720_0885 | Not Available | Negative | 1602070 - 1602783 | 25396.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HMPREF9720_0886 | Not Available | Positive | 1603007 - 1604905 | 68676.6 |
| hypothetical protein | HMPREF9720_0887 | Not Available | Negative | 1604918 - 1605679 | 28903.9 |
| hypothetical protein | HMPREF9720_0888 | Not Available | Negative | 1605686 - 1606525 | 31272.9 |
| hypothetical protein | HMPREF9720_0889 | Not Available | Negative | 1606537 - 1607325 | 29259.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
