Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretin and tonb n terminus short domain protein | HMPREF9720_2379 | Not Available | Negative | 158695 - 159111 | 15132.2 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_2380 | Not Available | Negative | 159238 - 160209 | 36397.4 |
| rna polymerase sigma-70 factor | HMPREF9720_2381 | Not Available | Negative | 160327 - 160923 | 23423.4 |
| hypothetical protein | HMPREF9720_2383 | Not Available | Negative | 161533 - 161685 | 5499.45 |
| drug resistance mfs transporter, drug:h+ antiporter-2 family | HMPREF9720_2384 | Not Available | Positive | 161695 - 163218 | 54147.3 |
| anaerobic sulfatase maturase | HMPREF9720_2385 | Not Available | Negative | 163294 - 164610 | 50009.9 |
| putative crispr-associated protein csc1 | HMPREF9720_2386 | Not Available | Positive | 164821 - 166335 | 55994.1 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF9720_2387 | Not Available | Positive | 166332 - 167072 | 26347.7 |
| beta-ketoacyl synthase, c-terminal domain protein | HMPREF9720_2388 | Not Available | Positive | 167077 - 168300 | 43319.8 |
| putative acyl carrier protein | HMPREF9720_2389 | Not Available | Positive | 168315 - 168563 | 9288.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
