Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2470 | Not Available | Positive | 1550898 - 1551827 | 33920.0 |
| hypothetical protein | HMPREF9720_2471 | Not Available | Negative | 1552355 - 1552477 | 4513.41 |
| hypothetical protein | HMPREF9720_2472 | Not Available | Negative | 1552612 - 1552866 | 9571.67 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | HMPREF9720_2473 | Not Available | Negative | 1553124 - 1553867 | 26608.9 |
| succinate dehydrogenase flavoprotein subunit | HMPREF9720_2474 | Not Available | Negative | 1553904 - 1555850 | 71618.2 |
| succinate dehydrogenase cytochrome b subunit, b558 family | HMPREF9720_2475 | Not Available | Negative | 1555884 - 1556588 | 25775.2 |
| 5-formyltetrahydrofolate cyclo-ligase | HMPREF9720_2476 | Not Available | Positive | 1556708 - 1557244 | 19471.3 |
| hypothetical protein | HMPREF9720_2477 | Not Available | Positive | 1557251 - 1557967 | 26356.6 |
| phospholipase, patatin family | HMPREF9720_2478 | Not Available | Positive | 1557924 - 1558769 | 30584.4 |
| hypothetical protein | HMPREF9720_2479 | Not Available | Positive | 1559080 - 1559220 | 5152.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
