Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kinase, pfkb family | HMPREF9720_2460 | Not Available | Negative | 1543309 - 1544310 | 35627.1 |
| 6-phosphofructokinase | HMPREF9720_2461 | Not Available | Negative | 1544338 - 1545318 | 34421.6 |
| pspc domain protein | HMPREF9720_2462 | Not Available | Negative | 1545452 - 1546771 | 48536.9 |
| hypothetical protein | HMPREF9720_2463 | Not Available | Negative | 1546790 - 1547593 | 26929.0 |
| transcriptional regulator, padr family | HMPREF9720_2464 | Not Available | Negative | 1547616 - 1547948 | 12757.5 |
| pspc domain protein | HMPREF9720_2465 | Not Available | Negative | 1547953 - 1548162 | 7597.7 |
| pspc domain protein | HMPREF9720_2466 | Not Available | Negative | 1548167 - 1548679 | 19535.5 |
| sigma-70 region 2 | HMPREF9720_2467 | Not Available | Positive | 1548853 - 1549446 | 23172.7 |
| hypothetical protein | HMPREF9720_2468 | Not Available | Positive | 1549421 - 1549918 | 18785.3 |
| hypothetical protein | HMPREF9720_2469 | Not Available | Positive | 1549931 - 1550869 | 33890.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
