Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2450 | Not Available | Negative | 1533401 - 1533850 | 16573.0 |
| dna primase | HMPREF9720_2451 | Not Available | Negative | 1533870 - 1537058 | 121278.0 |
| hypothetical protein | HMPREF9720_2452 | Not Available | Negative | 1537116 - 1537322 | 8281.9 |
| hypothetical protein | HMPREF9720_2453 | Not Available | Negative | 1537325 - 1537510 | 6828.93 |
| hypothetical protein | HMPREF9720_2454 | Not Available | Negative | 1537522 - 1537731 | 7960.66 |
| dna-binding helix-turn-helix protein | HMPREF9720_2455 | Not Available | Positive | 1538246 - 1538659 | 15371.3 |
| hypothetical protein | HMPREF9720_2456 | Not Available | Positive | 1538705 - 1539145 | 16792.3 |
| hypothetical protein | HMPREF9720_2457 | Not Available | Negative | 1539349 - 1539846 | 19145.4 |
| hypothetical protein | HMPREF9720_2458 | Not Available | Negative | 1540208 - 1542295 | 75457.6 |
| glycosyltransferase, group 2 family protein | HMPREF9720_2459 | Not Available | Positive | 1542363 - 1543259 | 33486.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
