Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2923 | Not Available | Negative | 1523517 - 1523669 | 6096.79 |
| gtra-like protein | HMPREF9720_2924 | Not Available | Negative | 1523723 - 1524091 | 14265.6 |
| hypothetical protein | HMPREF9720_2925 | Not Available | Negative | 1524088 - 1525038 | 36787.3 |
| hypothetical protein | HMPREF9720_2926 | Not Available | Negative | 1525005 - 1525856 | 32056.3 |
| anaerobic ribonucleoside-triphosphate reductase | HMPREF9720_2928 | Not Available | Positive | 1526330 - 1528555 | 85066.9 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | HMPREF9720_2929 | Not Available | Positive | 1528552 - 1529040 | 17918.4 |
| transcriptional regulator, arac family | HMPREF9720_2930 | Not Available | Negative | 1529264 - 1530100 | 32310.1 |
| site-specific recombinase, phage integrase family | HMPREF9720_2931 | Not Available | Positive | 1530554 - 1531963 | 55076.6 |
| transcriptional regulator, y4mf family | HMPREF9720_2932 | Not Available | Positive | 1532095 - 1532305 | 7788.73 |
| hypothetical protein | HMPREF9720_2449 | Not Available | Negative | 1532910 - 1533383 | 18580.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
