Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2892 | Not Available | Negative | 1494871 - 1495023 | 6148.43 |
| hypothetical protein | HMPREF9720_2893 | Not Available | Negative | 1495153 - 1496484 | 51671.2 |
| hypothetical protein | HMPREF9720_2894 | Not Available | Negative | 1496481 - 1496897 | 16136.1 |
| hypothetical protein | HMPREF9720_2895 | Not Available | Negative | 1496911 - 1497132 | 9023.77 |
| hypothetical protein | HMPREF9720_2896 | Not Available | Negative | 1497144 - 1497359 | 7821.07 |
| 3-dehydroquinate synthase | HMPREF9720_2897 | Not Available | Negative | 1498403 - 1499743 | 48938.6 |
| hypothetical protein | HMPREF9720_2898 | Not Available | Negative | 1499843 - 1499986 | 5317.56 |
| ser/thr phosphatase family protein | HMPREF9720_2899 | Not Available | Positive | 1500123 - 1501316 | 44738.2 |
| glycerophosphodiester phosphodiesterase family protein | HMPREF9720_2900 | Not Available | Positive | 1501326 - 1502222 | 34400.4 |
| had hydrolase, family iia | HMPREF9720_2901 | Not Available | Positive | 1502222 - 1503088 | 31659.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
