Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2882 | Not Available | Positive | 1488352 - 1488660 | 11558.0 |
| conjugative transposon tram protein | HMPREF9720_2883 | Not Available | Positive | 1488641 - 1489993 | 49068.3 |
| conjugative transposon tran protein | HMPREF9720_2884 | Not Available | Positive | 1490028 - 1491014 | 37189.9 |
| hypothetical protein | HMPREF9720_2885 | Not Available | Positive | 1491017 - 1491592 | 21037.4 |
| chc2 zinc finger domain protein | HMPREF9720_2886 | Not Available | Positive | 1491600 - 1492502 | 33727.4 |
| hypothetical protein | HMPREF9720_2887 | Not Available | Positive | 1492499 - 1493002 | 19169.8 |
| hypothetical protein | HMPREF9720_2888 | Not Available | Positive | 1493290 - 1493526 | 8922.23 |
| hypothetical protein | HMPREF9720_2889 | Not Available | Positive | 1493735 - 1493980 | 9615.97 |
| hypothetical protein | HMPREF9720_2890 | Not Available | Negative | 1494014 - 1494322 | 11906.5 |
| hypothetical protein | HMPREF9720_2891 | Not Available | Negative | 1494376 - 1494621 | 9349.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
